BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033G03SP1|AL429792
(908 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig979 1705 0.0
>3x_Contig979
Length = 3913
Score = 1705 bits (859), Expect = 0.0
Identities = 879/887 (99%)
Strand = Plus / Minus
Query: 1 gatcgtgaatcttttgcagctcatttctctttattcttcttcatgggaaacttcaataat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2434 gatcgtgaatcttttgcagctcatttctctttattcttcttcatgggaaacttcaataat 2375
Query: 61 ttacgcgttttaatttcgttctttgcctttattctaacgacctttatgaatggaataaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2374 ttacgcgttttaatttcgttctttgcctttattctaacgacctttatgaatggaataaaa 2315
Query: 121 gagacagatacagtaaatgcaccgttgttactcgtgatatcaagcgctagtatggatgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2314 gagacagatacagtaaatgcaccgttgttactcgtgatatcaagcgctagtatggatgct 2255
Query: 181 cttaagattgagatcaagctgtgggagcgtgctttcgagaaagagcatggaaggcttcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2254 cttaagattgagatcaagctgtgggagcgtgctttcgagaaagagcatggaaggcttcct 2195
Query: 241 gagaaagatgatataaaaaaggataaagaggtcaagagaaagtataaacagtatgcacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2194 gagaaagatgatataaaaaaggataaagaggtcaagagaaagtataaacagtatgcacag 2135
Query: 301 ctcaagaaggatgctactgttaaaccatcggtggaggttaacgtagagcaaacaccagtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2134 ctcaagaaggatgctactgttaaaccatcggtggaggttaacgtagagcaaacaccagtg 2075
Query: 361 aagtcgcatgtgaataacacaaaggctgaattcggaccgactcctcaaatgaatgggaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2074 aagtcgcatgtgaataacacaaaggctgaattcggaccgactcctcaaatgaatgggaaa 2015
Query: 421 ttagttagtatatttgagatgcaagtgtctgccatgaaaactcaccagtcggatcaagaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2014 ttagttagtatatttgagatgcaagtgtctgccatgaaaactcaccagtcggatcaagaa 1955
Query: 481 gatatagttggctcgccagtwagatcaaatgacctggtaaggcgccaattgaacttctca 540
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1954 gatatagttggctcgccagtaagatcaaatgacctggtaaggcgccaattgaacttctca 1895
Query: 541 ataacgccgaactcttctccaatgaagcaagttccaaatctatctgcgaatattgttgtg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1894 ataacgccgaactcttctccaatgaagcaagttccaaatctatctgcgaatattgttgtg 1835
Query: 601 tcaagaccgaaatatggaccaaactccccaatgcggatcggcgatattggattgcagttg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1834 tcaagaccgaaatatggaccaaactccccaatgcggatcggcgatattggattgcagttg 1775
Query: 661 tcagaaacaccaaagacgcttggtagaaccctggatttgaaaagttctcccttcagccca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1774 tcagaaacaccaaagacgcttggtagaaccctggatttgaaaagttctcccttcagccca 1715
Query: 721 tcgccgctgattaaaaggccggtgaagacactgtcccaattagcgaaggaacatgccatt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1714 tcgccgctgattaaaaggccggtgaagacactgtcccaattagcgaaggaacatgccatt 1655
Query: 781 ataaaagacgaattcgaatctaacccagaagatttcagcgaattcactgcgattagaacg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1654 ataaaagacgaattcgaatctaacccagaagatttcagcgaattcactgcgattacaaac 1595
Query: 841 cttatggaaaagctgatgcaggaagaacatatggatataattgawga 887
|||||||||||||||||||||||||| |||| ||||||||||| ||
Sbjct: 1594 gttatggaaaagctgatgcaggaagaatatatcgatataattgaaga 1548
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6315
Number of Sequences: 1807
Number of extensions: 6315
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 908
length of database: 10,358,551
effective HSP length: 16
effective length of query: 892
effective length of database: 10,329,639
effective search space: 9214037988
effective search space used: 9214037988
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)